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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41366721_41368411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41366721 - 41368411

Intron Length:

1691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

GTATATGTAAAA

Flanking Amino Acid:

MHIKVGPRWKGKLAGLCGNF

Intron Amino Acid Position:

965

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

0.61

0.8

76.4

32.2

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

45.5

-0.3

2.2

59.33

39.9

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689