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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41368532_41371071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41368532 - 41371071

Intron Length:

2540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCTTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTGTGTAAAAT

Flanking Amino Acid:

VFGDSWVLGQCKSPNETLRP

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

25.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

72.8

0.51

1.1

75.7

38.5

Minor 5ss

41.5

-0.9

2.7

53.7

43.5

Minor BPS

45.7

-0.2

2.4

72.05

45.1

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689