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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41371189_41374054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41371189 - 41374054

Intron Length:

2866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CTCTCCCCACCT

Flanking Amino Acid:

SDVFAPCRNVIDVTSFVKNC

Intron Amino Acid Position:

1044

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

94.4

0.6

87.9

29.4

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

46.8

-0.1

2.2

68.62

47.8

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689