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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41374268_41388176_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41374268 - 41388176

Intron Length:

13909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTTTTCTC

5'SS Class:

weak_major

3'SS Sequence:

CCATATATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATATAT

Flanking Amino Acid:

RTHSEKRTSLPRYLEPVDKC

Intron Amino Acid Position:

1115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.2

55.5

41.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

62.8

0.29

1.1

57.5

41.7

Minor 5ss

41.4

-1

2.7

51.6

39.2

Minor BPS

61.4

0.44

86.66

38.6

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689