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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41388355_41389246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41388355 - 41389246

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCAC

5'SS Class:

major

3'SS Sequence:

AGTTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTAACCTCAATA

Flanking Amino Acid:

DSCCPEWECPCQCSVLSELS

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

65.7

40.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.67

0.8

77.9

35.9

Minor 5ss

37.4

-1.4

54.6

42.6

Minor BPS

59.4

0.29

1.6

66.66

39.3

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689