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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41390624_41391296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41390624 - 41391296

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

TGTCCCTAAAAT

Flanking Amino Acid:

KLLINRLARKVVVDSVIPSL

Intron Amino Acid Position:

1253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

75.6

0.58

0.9

70.7

39.8

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

61.8

0.45

1.8

79.96

41.3

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689