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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41393971_41395795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41393971 - 41395795

Intron Length:

1825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

AATGTGTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TAATTCTCAATT

Flanking Amino Acid:

RSVFIPCHKKVSPQEFCEKM

Intron Amino Acid Position:

1388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

64.2

0.32

54.8

44.9

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

65.8

0.57

1.5

78.19

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689