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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41395938_41396273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41395938 - 41396273

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGCAAA

5'SS Class:

major

3'SS Sequence:

TTATGACTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGACTT

Flanking Amino Acid:

CIKWRTSDYCSLSCPEGKEY

Intron Amino Acid Position:

1435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

67.5

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.5

0.62

0.9

70.6

39.9

Minor 5ss

41.6

-0.9

2.9

58.5

45.8

Minor BPS

50.3

0.09

77.48

39.2

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689