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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41396460_41396947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41396460 - 41396947

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

ATTTTTCTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTCTTGTCAAAG

Flanking Amino Acid:

SDLCIPEEKCTCTDNRGQPH

Intron Amino Acid Position:

1497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

76.2

32.6

Major BPS

75.8

0.64

65.8

Major PPT

86.8

0.83

0.7

85.4

28.6

Minor 5ss

37.9

-1.4

2.7

45.5

37.1

Minor BPS

45.2

-0.5

2.3

56.14

45.3

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689