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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41402401_41403212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41402401 - 41403212

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTACATGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTTGTATTACAT

Flanking Amino Acid:

TENGTQIVYEEGSTWSSNCT

Intron Amino Acid Position:

1818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

73.9

0.59

30.2

Major PPT

70.5

0.46

66.8

43.4

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

48.4

-0

73.71

43.1

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689