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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41403377_41409542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41403377 - 41409542

Intron Length:

6166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATGGAGT

5'SS Class:

major

3'SS Sequence:

TGTATTTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TATGCCTTATTT

Flanking Amino Acid:

GEVSNNNSSVSKKEERICQK

Intron Amino Acid Position:

1862

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.1

60.1

44.2

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

78.8

0.65

78.1

39.9

Minor 5ss

42.3

-0.9

3.2

62.3

43.3

Minor BPS

65.9

0.58

1.7

80.93

41.2

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689