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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41409623_41412206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41409623 - 41412206

Intron Length:

2584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TATTTACTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTTATTTACT

Flanking Amino Acid:

RKNDCISQSPINVASCDGKC

Intron Amino Acid Position:

1889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

78.4

37.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

75.6

0.58

0.8

70.2

35.1

Minor 5ss

43.4

-0.7

2.9

58.5

45.8

Minor BPS

59.8

0.39

1.9

80.74

40.9

Associated Gene:

Gene:

OTOGL

Ensembl Gene ID:

ENSAPLG00000015946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042763

41321719 - 41412407

90689

ENSAPLT00000016651

41321719 - 41412407

90689