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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41462315_41463856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41462315 - 41463856

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGAATATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTAATTAAAT

Flanking Amino Acid:

TSLTVFTPADVPGAVSDLHL

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

66.6

0.37

63.4

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

59.5

0.38

1.9

81.06

39.4

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257