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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41464051_41466162_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41464051 - 41466162

Intron Length:

2112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTCTGATTT

5'SS Class:

weak_major

3'SS Sequence:

TGAAAACATTAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TACTTTGGAACC

Flanking Amino Acid:

KNKVFSVCLFPSAISNSVET

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.3

59.9

39.5

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

48.8

-0

1.2

47.3

Minor 5ss

-0.2

2.9

71.3

39.8

Minor BPS

46.8

-0.2

2.1

59.36

40.1

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257