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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41474092_41477152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41474092 - 41477152

Intron Length:

3061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACTACGT

5'SS Class:

major

3'SS Sequence:

TGTACCTGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TGTGCTATAACA

Flanking Amino Acid:

EQRVINTTHLHKVHFPSQII

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.1

52.1

44.6

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

67.7

0.4

62.3

39.6

Minor 5ss

32.8

-2

3.4

45.8

Minor BPS

60.8

0.34

1.7

72.93

38.9

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257