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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41481184_41482709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41481184 - 41482709

Intron Length:

1526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

AACATTTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TAAAACTTAACA

Flanking Amino Acid:

DTIIFRTSEGAPGDPPKNVI

Intron Amino Acid Position:

967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

0.52

1.1

77.7

35.3

Major PPT

0.61

0.9

73.4

40.9

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

65.9

0.49

1.5

72.06

38.8

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257