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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41491766_41494727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41491766 - 41494727

Intron Length:

2962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATGTACT

Flanking Amino Acid:

QNNTEKIFYQNVSGSDNEAN

Intron Amino Acid Position:

1311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.65

0.9

83.4

25.4

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

49.2

0.02

2.1

72.78

43.1

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257