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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41494870_41496783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41494870 - 41496783

Intron Length:

1914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGATGT

5'SS Class:

major

3'SS Sequence:

TGTATCTTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TGAGTATTAACC

Flanking Amino Acid:

NAVQFTTMESVPDVVQNVRC

Intron Amino Acid Position:

1358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

73.6

37.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

72.6

0.51

1.1

75.8

38.3

Minor 5ss

-1.6

48.8

46.8

Minor BPS

55.5

0.15

1.7

64.92

40.2

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257