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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41497054_41505898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41497054 - 41505898

Intron Length:

8845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATT

Flanking Amino Acid:

ICNASTLPERVPSAPRDIVF

Intron Amino Acid Position:

1448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.1

0.74

0.8

78.3

34.8

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257