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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41513257_41515812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41513257 - 41515812

Intron Length:

2556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGACAA

5'SS Class:

major

3'SS Sequence:

TATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

PTCYLIDIASVDNDNYKAQF

Intron Amino Acid Position:

1600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.9

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.5

0.82

0.8

81.1

35.8

Minor 5ss

33.5

-1.9

3.2

43.6

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257