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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41518313_41519235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41518313 - 41519235

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGAATT

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TACTCATTAACA

Flanking Amino Acid:

LKGGHTYNVSVYAINGAGAG

Intron Amino Acid Position:

1744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.3

75.5

40.6

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

81.4

0.71

86.9

31.1

Minor 5ss

40.4

-1.1

3.1

54.2

Minor BPS

72.1

0.69

1.6

78.05

38.2

Associated Gene:

Gene:

PTPRQ

Ensembl Gene ID:

ENSAPLG00000016187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016904

41447973 - 41553229

105257