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Intron Name: Anas_platyrhynchos_platyrhynchos_1_415931_417172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

415931 - 417172

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTCAAATCT

Flanking Amino Acid:

LLTLLETRRSGVEGLMDSYT

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

68.8

43.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

88.3

0.86

0.7

83.5

31.6

Minor 5ss

33.1

-1.9

2.8

41.8

Minor BPS

49.9

0.07

2.2

80.25

41.8

Associated Gene:

Gene:

PPP6R2

Ensembl Gene ID:

ENSAPLG00000003046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048408

381682 - 447727

66046

ENSAPLT00000003179

381682 - 447727

66046