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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41743193_41753815_F

Intron Information:

Intron Rank:

131430

Intron Class:

major

Intron Phase:

Intron Coordinates:

41743193 - 41753815

Intron Length:

10623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACATCCC

5'SS Class:

major

3'SS Sequence:

GTTCTTTTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TGTTCTTTTACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.2

56.2

41.2

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

0.68

0.9

73.9

40.4

Minor 5ss

36.2

-1.6

3.2

49.3

40.1

Minor BPS

71.4

0.66

1.6

79.48

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043621

41742446 - 41754690

12245