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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41794030_41794240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41794030 - 41794240

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

ACCTTCTTGACT

Flanking Amino Acid:

LYLDNMGLKQVSPGAFAGLG

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

73.9

0.59

65.3

41.6

Major PPT

81.5

0.71

0.9

76.2

37.8

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

70.2

0.72

1.2

76.47

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041513

41792428 - 41796272

3845