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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41807575_41808041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41807575 - 41808041

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TAAGCTTGAGAT

Flanking Amino Acid:

LTPKKIIESQDSTPVPSPPV

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

75.6

0.58

0.9

72.4

37.7

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

-0.3

1.8

60.42

42.7

Associated Gene:

Gene:

RANGAP1

Ensembl Gene ID:

ENSAPLG00000006767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007089

41799948 - 41816429

16482