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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41812138_41813134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41812138 - 41813134

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAT

U12 Branch Point Sequence:

GTAGGATAAACT

Flanking Amino Acid:

NCGMGIGGGKILAAALKECH

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

72.2

0.5

0.9

66.5

35.7

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

43.1

-0.4

2.3

62.57

46.9

Associated Gene:

Gene:

RANGAP1

Ensembl Gene ID:

ENSAPLG00000006767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007089

41799948 - 41816429

16482