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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41833571_41834942_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41833571 - 41834942

Intron Length:

1372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TGTTCTAAGACA

Flanking Amino Acid:

RVRKAYKRPQQELETFSLLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

85.8

0.81

0.7

80.4

24.9

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

49.5

-0

67.93

38.4

Associated Gene:

Gene:

ZC3H7B

Ensembl Gene ID:

ENSAPLG00000005880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044047

41833325 - 41860024

26700

ENSAPLT00000006154

41833325 - 41860680

27356