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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41844321_41845058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41844321 - 41845058

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGGAC

5'SS Class:

major

3'SS Sequence:

CTTCTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTTTCCCAGCA

Flanking Amino Acid:

HQGIFTFLCEICFDSKPRII

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.9

38.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

85.4

0.8

0.7

Minor 5ss

27.8

-2.5

3.7

40.2

46.2

Minor BPS

47.5

-0.1

66.79

39.3

Associated Gene:

Gene:

ZC3H7B

Ensembl Gene ID:

ENSAPLG00000005880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044047

41833325 - 41860024

26700

ENSAPLT00000006154

41833325 - 41860680

27356