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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41846097_41849622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41846097 - 41849622

Intron Length:

3526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

GGTAGCTCAGTC

Flanking Amino Acid:

LKVWLLQQYSGMTHEDIVQE

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

83.3

0.75

0.8

76.1

37.8

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

41.3

-0.6

49.22

40.8

Associated Gene:

Gene:

ZC3H7B

Ensembl Gene ID:

ENSAPLG00000005880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044047

41833325 - 41860024

26700

ENSAPLT00000006154

41833325 - 41860680

27356