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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41849709_41854433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41849709 - 41854433

Intron Length:

4725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAG

U12 Branch Point Sequence:

TTTGCCTGAGGT

Flanking Amino Acid:

AHASKPANSMASPRAPTSST

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

66.6

39.9

Major BPS

44.9

-0.3

1.6

42.9

Major PPT

83.5

0.75

0.7

76.7

Minor 5ss

37.2

-1.4

3.3

46.9

Minor BPS

50.3

0.09

2.1

76.75

45.6

Associated Gene:

Gene:

ZC3H7B

Ensembl Gene ID:

ENSAPLG00000005880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044047

41833325 - 41860024

26700

ENSAPLT00000006154

41833325 - 41860680

27356