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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41888232_41888799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41888232 - 41888799

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGAT

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATTT

Flanking Amino Acid:

KKVFVPDEQKDEKYWTRRKK

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.81

0.9

80.4

36.6

Minor 5ss

37.6

-1.4

3.5

55.7

48.5

Minor BPS

63.5

0.5

1.6

78.46

Associated Gene:

Gene:

TEF

Ensembl Gene ID:

ENSAPLG00000005838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006045

41886204 - 41889015

2812