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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41937264_41939008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41937264 - 41939008

Intron Length:

1745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

AAGCAATCAATT

Flanking Amino Acid:

WKPGSGIIHQIILENYSYPG

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

93.1

0.97

0.6

18.6

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

43.1

-0.4

1.8

56.23

39.4

Associated Gene:

Gene:

ACO2

Ensembl Gene ID:

ENSAPLG00000005198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035839

41928013 - 41948310

20298

ENSAPLT00000005407

41928013 - 41948583

20571