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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41939168_41939559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41939168 - 41939559

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTGTTTTAATT

Flanking Amino Acid:

GIPWELKCPKVIGVKLTGKL

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.6

0.46

1.1

75.9

37.2

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

ACO2

Ensembl Gene ID:

ENSAPLG00000005198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005407

41928013 - 41948583

20571

ENSAPLT00000035839

41928013 - 41948310

20298