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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41940843_41941067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41940843 - 41941067

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTTCTTATTC

Flanking Amino Acid:

KKYLGKTGRADIAALADEFK

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.9

0.88

0.7

81.7

34.6

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

66.4

0.49

1.6

73.26

38.6

Associated Gene:

Gene:

ACO2

Ensembl Gene ID:

ENSAPLG00000005198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035839

41928013 - 41948310

20298

ENSAPLT00000005407

41928013 - 41948583

20571