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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41948038_41948439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41948038 - 41948439

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

GGGAAAATAAAA

Flanking Amino Acid:

VGLADFAPGKPLKCIIKHPN

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

0.3

62.3

30.4

Major PPT

78.4

0.64

0.7

77.5

24.5

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

37.9

-0.9

1.9

43.1

36.8

Associated Gene:

Gene:

ACO2

Ensembl Gene ID:

ENSAPLG00000005198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005407

41928013 - 41948583

20571