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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41951470_41952053_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

41951470 - 41952053

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TTGGCGTGGCCAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CCATCCTTAGCC

Flanking Amino Acid:

PPESLQQPAKFDEAEQVWVW

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

57.1

0.16

1.2

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

63.8

0.41

1.6

67.04

44.5

Associated Gene:

Gene:

POLR3H

Ensembl Gene ID:

ENSAPLG00000005063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005219

41950529 - 41956149

5621