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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41963746_41963968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41963746 - 41963968

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

TCCTCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

CCAGTCCCACCG

Flanking Amino Acid:

GTEDIFVHVSDIEGEYVPVE

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

77.8

0.63

0.7

72.7

25.4

Minor 5ss

30.4

-2.2

2.8

30.3

Minor BPS

-1.2

1.9

31.93

Associated Gene:

Gene:

CSDC2

Ensembl Gene ID:

ENSAPLG00000005057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005215

41963341 - 41964131

791