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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41982772_41983231_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
41982772 - 41983231

Intron Length:
460

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTAAGTTAA

5'SS Class:
major

3'SS Sequence:
TTAATTGTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTGATTTTAATA

Flanking Amino Acid:
GSGGISSCAPGGTLLGPPDL

Intron Amino Acid Position:
62

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.1
73.6
33.2

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.7
0.65
1
72.5
42.2

Minor 5ss
42.4
-0.8
2.9
59
45.5

Minor BPS
66.8
0.52
1.2
71.01
35.8

Associated Gene:

Gene:
DESI1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

41980464 - 41989495
9032