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Intron Name: Anas_platyrhynchos_platyrhynchos_1_41997934_41998804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41997934 - 41998804

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTCTGCATAATT

Flanking Amino Acid:

DEQKVQISPPGFHVIFLPYA

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.4

37.1

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

73.2

0.52

0.9

69.4

36.8

Minor 5ss

27.5

-2.6

3.6

37.2

47.4

Minor BPS

58.5

0.34

2.1

80.51

41.8

Associated Gene:

Gene:

XRCC6

Ensembl Gene ID:

ENSAPLG00000004469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004614

41989738 - 42002111

12374