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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42015940_42018403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42015940 - 42018403

Intron Length:

2464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGAAG

5'SS Class:

major

3'SS Sequence:

TTCCTCTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TCTTGCTTACTC

Flanking Amino Acid:

GLLLFTEILKRQPVEITLFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

41.1

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

84.1

0.77

0.7

79.9

25.4

Minor 5ss

26.6

-2.7

31.4

42.6

Minor BPS

55.9

0.17

2.1

69.44

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018913

42015884 - 42026151

10268