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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42020832_42021807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42020832 - 42021807

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGTAC

U12 Branch Point Sequence:

TCCTCTGGTACC

Flanking Amino Acid:

NTLESFRSACRLAVEFQTDP

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

43.7

-0.3

1.4

38.5

41.4

Major PPT

75.3

0.57

0.9

69.5

41.6

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

42.4

-0.6

2.3

54.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018913

42015884 - 42026151

10268