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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42030102_42031173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

42030102 - 42031173

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCTCCT

5'SS Class:

major

3'SS Sequence:

GTACCCTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAC

U12 Branch Point Sequence:

AGTTCACTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

62.3

43.9

Major BPS

66.1

0.4

1.1

69.1

37.9

Major PPT

68.5

0.42

0.9

65.9

35.6

Minor 5ss

35.6

-1.6

3.2

50.7

45.7

Minor BPS

51.3

0.03

68.11

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004100

42026719 - 42036304

9586