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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42033107_42033686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42033107 - 42033686

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTCTCCTACACA

Flanking Amino Acid:

HQTTPCSQQRAVAVLLSNVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

0.72

38.9

Major PPT

73.4

0.53

0.8

68.2

30.9

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

52.1

0.06

2.2

66.36

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004100

42026719 - 42036304

9586