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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42037087_42039106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42037087 - 42039106

Intron Length:

2020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAGTCT

5'SS Class:

major

3'SS Sequence:

CCTTCTCTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GATTTTTTAAAG

Flanking Amino Acid:

EYLYVKNQDVALHVASQPWH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

68.2

37.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.3

0.68

0.7

72.4

32.3

Minor 5ss

38.9

-1.3

3.4

53.4

45.7

Minor BPS

61.7

0.23

1.5

62.22

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045376

42036861 - 42041999

5139

ENSAPLT00000020779

42036861 - 42041821

4961