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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42039214_42040051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42039214 - 42040051

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CCCTTTGTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGCTCACTAATG

Flanking Amino Acid:

QPEILRLVTLFVRYQSSNVI

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.4

44.7

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

68.2

0.41

1.1

66.2

38.8

Minor 5ss

33.5

-1.9

2.8

36.6

41.8

Minor BPS

48.9

-0.2

58.16

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045376

42036861 - 42041999

5139

ENSAPLT00000020779

42036861 - 42041821

4961