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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42040184_42040548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42040184 - 42040548

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCCGACTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TGGTCTGGAAAT

Flanking Amino Acid:

SRALHLFLRQVQSSHCQMEA

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

71.6

0.54

33.1

Major PPT

62.9

0.29

56.1

38.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

46.3

-0.2

2.2

66.73

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020779

42036861 - 42041821

4961

ENSAPLT00000045376

42036861 - 42041999

5139