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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42043404_42043679_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

42043404 - 42043679

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

GACTGCGCTGCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GGGCCCTTGACT

Flanking Amino Acid:

KQRVDSGLEIYKKLFEVKRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.2

-0

1.3

50.1

41.8

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

63.1

0.3

54.3

41.1

Minor 5ss

95.2

1.52

0.7

94.3

17.7

Minor BPS

67.9

0.65

1.3

74.71

41.7

Associated Gene:

Gene:

CCDC134

Ensembl Gene ID:

ENSAPLG00000003824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003914

42043274 - 42045288

2015