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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42043802_42044007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42043802 - 42044007

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGCGTG

5'SS Class:

major

3'SS Sequence:

GGGACTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

TGACCGGGGACT

Flanking Amino Acid:

IDIMLKGLFKVLEDSRAVLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

40.1

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

66.6

0.37

58.2

Minor 5ss

36.2

-1.6

3.5

46.7

43.3

Minor BPS

38.6

-0.8

2.6

59.1

43.8

Associated Gene:

Gene:

CCDC134

Ensembl Gene ID:

ENSAPLG00000003824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003914

42043274 - 42045288

2015