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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42044093_42044517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42044093 - 42044517

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTAGG

5'SS Class:

major

3'SS Sequence:

CTCTCGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGCTGCTGACGG

Flanking Amino Acid:

PFPQDEKLKDAYSHVVENTA

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

47.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.4

0.53

0.8

64.7

36.5

Minor 5ss

34.2

-1.8

42.3

44.6

Minor BPS

37.1

-1.1

2.2

37.22

44.8

Associated Gene:

Gene:

CCDC134

Ensembl Gene ID:

ENSAPLG00000003824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003914

42043274 - 42045288

2015