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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42044700_42044924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42044700 - 42044924

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

CTTTGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGGCAG

U12 Branch Point Sequence:

TGTGCTTTGCCC

Flanking Amino Acid:

RGPHSQLLGLMAQELGISEK

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

55.4

40.2

Major BPS

37.4

-0.7

1.7

42.8

49.4

Major PPT

76.1

0.59

0.8

69.8

Minor 5ss

31.1

-2.2

3.4

39.5

41.3

Minor BPS

43.3

-0.5

3.5

65.85

40.5

Associated Gene:

Gene:

CCDC134

Ensembl Gene ID:

ENSAPLG00000003824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003914

42043274 - 42045288

2015